Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.93■□□□□ 0.3
CASD1Q96PB1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 AC026410.3-201ENST00000514280 936 ntBASIC16.93■□□□□ 0.3
CASD1Q96PB1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 AC090340.1-201ENST00000620778 4980 ntBASIC16.93■□□□□ 0.3
CASD1Q96PB1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.93■□□□□ 0.3
CASD1Q96PB1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASD1Q96PB1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 AC106760.1-201ENST00000508690 800 ntBASIC16.92■□□□□ 0.3
CASD1Q96PB1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 DRD5P1-201ENST00000456605 1438 ntBASIC16.92■□□□□ 0.3
CASD1Q96PB1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CASD1Q96PB1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASD1Q96PB1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASD1Q96PB1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASD1Q96PB1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASD1Q96PB1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASD1Q96PB1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASD1Q96PB1 MIR648-201ENST00000385046 94 ntBASIC16.91■□□□□ 0.3
CASD1Q96PB1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 AC016694.1-201ENST00000434179 700 ntBASIC16.91■□□□□ 0.3
CASD1Q96PB1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.91■□□□□ 0.3
CASD1Q96PB1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms