Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 AC104819.1-201ENST00000504587 486 ntBASIC13.94□□□□□ -0.18
BEST4Q8NFU0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 AP002414.4-201ENST00000589764 1148 ntBASIC13.94□□□□□ -0.18
BEST4Q8NFU0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 AC232323.1-201ENST00000540724 2099 ntBASIC13.94□□□□□ -0.18
BEST4Q8NFU0 REXO1L5P-201ENST00000622260 2098 ntBASIC13.94□□□□□ -0.18
BEST4Q8NFU0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BEST4Q8NFU0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AC087481.3-201ENST00000602886 1894 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AL031133.1-201ENST00000406807 723 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AP002383.4-201ENST00000442518 975 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 PAWRP1-201ENST00000451083 565 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 BX005266.1-201ENST00000473402 457 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AC092329.2-201ENST00000598402 547 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AC064862.7-201ENST00000604520 867 ntBASIC13.93□□□□□ -0.18
BEST4Q8NFU0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.93□□□□□ -0.18
BEST4Q8NFU0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms