Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AC011467.2-201ENST00000598425 242 ntBASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 FLJ16779-201ENST00000612722 7638 ntBASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AC148477.5-201ENST00000625164 1645 ntBASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AC126365.1-201ENST00000578585 1514 ntBASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 IGHV3-41-201ENST00000613121 348 ntBASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 PMPCAP1-201ENST00000508114 1576 ntBASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LYSMD2Q8IV50 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms