Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 AC098859.1-201ENST00000502915 1238 ntBASIC15.4■□□□□ 0.06
RAB43Q86YS6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 AC100757.3-201ENST00000622361 1406 ntBASIC15.4■□□□□ 0.06
RAB43Q86YS6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB43Q86YS6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB43Q86YS6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RAB43Q86YS6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 DBET-201ENST00000630918 3363 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 LINC02228-204ENST00000642115 2962 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 UGT1A2P-201ENST00000454886 866 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 HLA-V-204ENST00000476601 1289 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 RNA5SP410-201ENST00000516285 106 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 SPDYE12P-201ENST00000618416 771 ntBASIC15.39■□□□□ 0.05
RAB43Q86YS6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB43Q86YS6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB43Q86YS6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB43Q86YS6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AC009118.2-201ENST00000613275 655 ntBASIC15.38■□□□□ 0.05
RAB43Q86YS6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB43Q86YS6 AL139011.1-202ENST00000642063 584 ntBASIC15.38■□□□□ 0.05
RAB43Q86YS6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms