Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 RCN1P2-201ENST00000398357 915 ntBASIC16.25■□□□□ 0.19
PACS2Q86VP3 AC096633.1-201ENST00000422446 749 ntBASIC16.25■□□□□ 0.19
PACS2Q86VP3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 RN7SL510P-201ENST00000581311 263 ntBASIC16.25■□□□□ 0.19
PACS2Q86VP3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 AC005562.1-201ENST00000583030 3219 ntBASIC16.25■□□□□ 0.19
PACS2Q86VP3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 EGFEM1P-202ENST00000431685 1563 ntBASIC16.25■□□□□ 0.19
PACS2Q86VP3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 FAM220CP-201ENST00000395253 831 ntBASIC16.24■□□□□ 0.19
PACS2Q86VP3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 FAAHP1-202ENST00000446499 1238 ntBASIC16.24■□□□□ 0.19
PACS2Q86VP3 HLA-J-202ENST00000469281 1241 ntBASIC16.24■□□□□ 0.19
PACS2Q86VP3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC011467.2-201ENST00000598425 242 ntBASIC16.24■□□□□ 0.19
PACS2Q86VP3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PACS2Q86VP3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PACS2Q86VP3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PACS2Q86VP3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PACS2Q86VP3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PACS2Q86VP3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PACS2Q86VP3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PACS2Q86VP3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms