Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
GBX2P52951 AC136632.2-201ENST00000512891 861 ntBASIC14.36□□□□□ -0.11
GBX2P52951 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.36□□□□□ -0.11
GBX2P52951 MIR4515-201ENST00000584082 81 ntBASIC14.36□□□□□ -0.11
GBX2P52951 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.36□□□□□ -0.11
GBX2P52951 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GBX2P52951 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GBX2P52951 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
GBX2P52951 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GBX2P52951 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.36□□□□□ -0.11
GBX2P52951 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.36□□□□□ -0.11
GBX2P52951 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.36□□□□□ -0.11
GBX2P52951 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GBX2P52951 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.35□□□□□ -0.11
GBX2P52951 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GBX2P52951 AC021087.4-201ENST00000563761 564 ntBASIC14.35□□□□□ -0.11
GBX2P52951 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.35□□□□□ -0.11
GBX2P52951 AC008667.4-201ENST00000607370 168 ntBASIC14.35□□□□□ -0.11
GBX2P52951 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.35□□□□□ -0.11
GBX2P52951 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GBX2P52951 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GBX2P52951 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.34□□□□□ -0.11
GBX2P52951 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.34□□□□□ -0.11
GBX2P52951 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GBX2P52951 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GBX2P52951 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GBX2P52951 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
GBX2P52951 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.34□□□□□ -0.11
GBX2P52951 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GBX2P52951 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.34□□□□□ -0.11
GBX2P52951 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GBX2P52951 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.34□□□□□ -0.11
GBX2P52951 DUSP5P1-201ENST00000441325 1139 ntBASIC14.34□□□□□ -0.11
GBX2P52951 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.34□□□□□ -0.11
GBX2P52951 KRT18P31-201ENST00000506277 1292 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms