Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP11P51784 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
USP11P51784 AC074044.1-201ENST00000609673 707 ntBASIC18.06■□□□□ 0.48
USP11P51784 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 AL109936.8-201ENST00000641772 604 ntBASIC18.06■□□□□ 0.48
USP11P51784 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
USP11P51784 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP11P51784 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 AL162727.3-201ENST00000635661 2787 ntBASIC18.06■□□□□ 0.48
USP11P51784 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
USP11P51784 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.05■□□□□ 0.48
USP11P51784 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.05■□□□□ 0.48
USP11P51784 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.05■□□□□ 0.48
USP11P51784 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
USP11P51784 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.05■□□□□ 0.48
USP11P51784 TSPY16P-201ENST00000449843 468 ntBASIC18.05■□□□□ 0.48
USP11P51784 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.05■□□□□ 0.48
USP11P51784 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.05■□□□□ 0.48
USP11P51784 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.05■□□□□ 0.48
USP11P51784 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.05■□□□□ 0.48
USP11P51784 MIR4313-201ENST00000580760 101 ntBASIC18.05■□□□□ 0.48
USP11P51784 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.05■□□□□ 0.48
USP11P51784 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.05■□□□□ 0.48
USP11P51784 AC004840.1-201ENST00000636359 365 ntBASIC18.05■□□□□ 0.48
USP11P51784 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.05■□□□□ 0.48
USP11P51784 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.05■□□□□ 0.48
USP11P51784 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP11P51784 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.04■□□□□ 0.48
USP11P51784 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
USP11P51784 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.04■□□□□ 0.48
USP11P51784 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP11P51784 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP11P51784 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms