Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.72□□□□□ -0.21
CDKN1AP38936 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.72□□□□□ -0.21
CDKN1AP38936 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.72□□□□□ -0.21
CDKN1AP38936 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CDKN1AP38936 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDKN1AP38936 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 AC105020.1-201ENST00000435356 2205 ntBASIC13.71□□□□□ -0.21
CDKN1AP38936 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.71□□□□□ -0.21
CDKN1AP38936 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CDKN1AP38936 AC023310.3-201ENST00000557027 670 ntBASIC13.71□□□□□ -0.21
CDKN1AP38936 AC100756.1-201ENST00000562736 682 ntBASIC13.71□□□□□ -0.21
CDKN1AP38936 AC138749.3-201ENST00000567691 622 ntBASIC13.71□□□□□ -0.21
CDKN1AP38936 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.71□□□□□ -0.21
CDKN1AP38936 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 AC116165.1-201ENST00000611806 668 ntBASIC13.71□□□□□ -0.21
CDKN1AP38936 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CDKN1AP38936 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDKN1AP38936 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.71□□□□□ -0.21
CDKN1AP38936 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CDKN1AP38936 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CDKN1AP38936 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDKN1AP38936 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.71□□□□□ -0.22
CDKN1AP38936 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.7□□□□□ -0.22
CDKN1AP38936 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.7□□□□□ -0.22
CDKN1AP38936 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.7□□□□□ -0.22
CDKN1AP38936 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDKN1AP38936 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CDKN1AP38936 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CDKN1AP38936 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CDKN1AP38936 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.7□□□□□ -0.22
CDKN1AP38936 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDKN1AP38936 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDKN1AP38936 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
CDKN1AP38936 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
CDKN1AP38936 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.7□□□□□ -0.22
CDKN1AP38936 MYCLP2-201ENST00000449268 967 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms