Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CCL2P13500 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.01□□□□□ -0.17
CCL2P13500 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCL2P13500 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL2P13500 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCL2P13500 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL2P13500 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 MIR648-201ENST00000385046 94 ntBASIC14.01□□□□□ -0.17
CCL2P13500 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL2P13500 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.01□□□□□ -0.17
CCL2P13500 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.01□□□□□ -0.17
CCL2P13500 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL2P13500 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL2P13500 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL2P13500 AC106028.4-201ENST00000614509 607 ntBASIC14.01□□□□□ -0.17
CCL2P13500 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CCL2P13500 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL2P13500 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL2P13500 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL2P13500 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL2P13500 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL2P13500 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL2P13500 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14□□□□□ -0.17
CCL2P13500 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14□□□□□ -0.17
CCL2P13500 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14□□□□□ -0.17
CCL2P13500 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CCL2P13500 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CCL2P13500 TUBB3P1-201ENST00000405796 1332 ntBASIC14□□□□□ -0.17
CCL2P13500 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL2P13500 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14□□□□□ -0.17
CCL2P13500 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 PON3-203ENST00000427422 894 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14□□□□□ -0.17
CCL2P13500 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14□□□□□ -0.17
CCL2P13500 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14□□□□□ -0.17
CCL2P13500 AL512356.2-201ENST00000546955 174 ntBASIC14□□□□□ -0.17
CCL2P13500 BANF1P1-201ENST00000553684 263 ntBASIC14□□□□□ -0.17
CCL2P13500 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL2P13500 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 AC105021.1-202ENST00000570572 669 ntBASIC14□□□□□ -0.17
CCL2P13500 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14□□□□□ -0.17
CCL2P13500 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14□□□□□ -0.17
CCL2P13500 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL2P13500 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCL2P13500 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14□□□□□ -0.17
CCL2P13500 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14□□□□□ -0.17
CCL2P13500 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL2P13500 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL2P13500 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL2P13500 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
CCL2P13500 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL2P13500 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CCL2P13500 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCL2P13500 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms