Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 AL645608.8-201ENST00000606034 2086 ntBASIC16.81■□□□□ 0.28
RB1P06400 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 KRT18P43-201ENST00000469825 1281 ntBASIC16.81■□□□□ 0.28
RB1P06400 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.81■□□□□ 0.28
RB1P06400 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.81■□□□□ 0.28
RB1P06400 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.81■□□□□ 0.28
RB1P06400 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 AC025279.2-201ENST00000569730 653 ntBASIC16.81■□□□□ 0.28
RB1P06400 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.81■□□□□ 0.28
RB1P06400 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.81■□□□□ 0.28
RB1P06400 AL450472.2-201ENST00000603663 1156 ntBASIC16.81■□□□□ 0.28
RB1P06400 AC106872.11-201ENST00000605838 421 ntBASIC16.81■□□□□ 0.28
RB1P06400 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
RB1P06400 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RB1P06400 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RB1P06400 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RB1P06400 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.8■□□□□ 0.28
RB1P06400 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.8■□□□□ 0.28
RB1P06400 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.8■□□□□ 0.28
RB1P06400 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.8■□□□□ 0.28
RB1P06400 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 RHOQP1-201ENST00000555758 579 ntBASIC16.8■□□□□ 0.28
RB1P06400 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.8■□□□□ 0.28
RB1P06400 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.8■□□□□ 0.28
RB1P06400 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.8■□□□□ 0.28
RB1P06400 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RB1P06400 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.8■□□□□ 0.28
RB1P06400 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.8■□□□□ 0.28
RB1P06400 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.8■□□□□ 0.28
RB1P06400 AC139713.2-201ENST00000641328 2723 ntBASIC16.8■□□□□ 0.28
RB1P06400 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
RB1P06400 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RB1P06400 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.79■□□□□ 0.28
RB1P06400 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.79■□□□□ 0.28
RB1P06400 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RB1P06400 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 SLC25A24P2-201ENST00000415059 510 ntBASIC16.79■□□□□ 0.28
RB1P06400 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 Z93015.1-201ENST00000451718 390 ntBASIC16.79■□□□□ 0.28
RB1P06400 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RB1P06400 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.79■□□□□ 0.28
RB1P06400 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.79■□□□□ 0.28
RB1P06400 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms