Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.24■□□□□ 0.03
CLPTM1O96005 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.24■□□□□ 0.03
CLPTM1O96005 AC007967.3-201ENST00000434308 558 ntBASIC15.24■□□□□ 0.03
CLPTM1O96005 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.24■□□□□ 0.03
CLPTM1O96005 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.24■□□□□ 0.03
CLPTM1O96005 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.24■□□□□ 0.03
CLPTM1O96005 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 AC092919.2-201ENST00000623631 1645 ntBASIC15.24■□□□□ 0.03
CLPTM1O96005 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.24■□□□□ 0.03
CLPTM1O96005 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLPTM1O96005 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLPTM1O96005 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CLPTM1O96005 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.23■□□□□ 0.03
CLPTM1O96005 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 MIR648-201ENST00000385046 94 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 KRT16P4-201ENST00000453883 522 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 DUX4L17-201ENST00000557360 1267 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 MIR5100-201ENST00000579544 119 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 AL591684.3-201ENST00000605187 298 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 IFNL4P1-201ENST00000607083 540 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 AC010327.5-201ENST00000586923 3061 ntBASIC15.23■□□□□ 0.03
CLPTM1O96005 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.23■□□□□ 0.03
CLPTM1O96005 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CLPTM1O96005 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLPTM1O96005 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLPTM1O96005 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1O96005 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPTM1O96005 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1O96005 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1O96005 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.22■□□□□ 0.03
CLPTM1O96005 AC097374.2-201ENST00000618617 1306 ntBASIC15.22■□□□□ 0.03
CLPTM1O96005 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1O96005 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1O96005 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLPTM1O96005 AC006277.1-201ENST00000624348 1610 ntBASIC15.22■□□□□ 0.03
CLPTM1O96005 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms