Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
USH2AO75445 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC6.99□□□□□ -1.29
USH2AO75445 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 MADD-208ENST00000405573 1823 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC6.99□□□□□ -1.29
USH2AO75445 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USH2AO75445 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC6.99□□□□□ -1.29
USH2AO75445 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 TPM3P8-201ENST00000330554 643 ntBASIC6.98□□□□□ -1.29
USH2AO75445 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC6.98□□□□□ -1.29
USH2AO75445 AC079178.1-201ENST00000420915 656 ntBASIC6.98□□□□□ -1.29
USH2AO75445 ISCA2P1-201ENST00000425548 448 ntBASIC6.98□□□□□ -1.29
USH2AO75445 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 SOD2-202ENST00000367054 815 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 FO393414.2-201ENST00000405153 598 ntBASIC6.98□□□□□ -1.29
USH2AO75445 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 USP40-206ENST00000443711 628 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 RN7SL163P-201ENST00000583100 276 ntBASIC6.98□□□□□ -1.29
USH2AO75445 AC005618.3-201ENST00000624928 458 ntBASIC6.98□□□□□ -1.29
USH2AO75445 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 TK1-203ENST00000588734 1681 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC6.98□□□□□ -1.29
USH2AO75445 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC6.98□□□□□ -1.29
USH2AO75445 AC053503.3-201ENST00000448375 114 ntBASIC6.98□□□□□ -1.29
USH2AO75445 KRT18P25-201ENST00000508931 1278 ntBASIC6.98□□□□□ -1.29
USH2AO75445 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC6.98□□□□□ -1.29
USH2AO75445 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 REXO1L1P-202ENST00000608646 1974 ntBASIC6.98□□□□□ -1.29
USH2AO75445 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC6.98□□□□□ -1.29
USH2AO75445 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 HPGD-203ENST00000422112 805 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms