Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
OPHN1O60890 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
OPHN1O60890 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
OPHN1O60890 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.84■□□□□ 0.29
OPHN1O60890 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPHN1O60890 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
OPHN1O60890 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
OPHN1O60890 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
OPHN1O60890 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.83■□□□□ 0.28
OPHN1O60890 MIR943-201ENST00000401286 94 ntBASIC16.83■□□□□ 0.28
OPHN1O60890 AC236430.1-201ENST00000402231 743 ntBASIC16.83■□□□□ 0.28
OPHN1O60890 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.83■□□□□ 0.28
OPHN1O60890 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.83■□□□□ 0.28
OPHN1O60890 KRT8P48-201ENST00000515599 1220 ntBASIC16.83■□□□□ 0.28
OPHN1O60890 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.83■□□□□ 0.28
OPHN1O60890 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.83■□□□□ 0.28
OPHN1O60890 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.83■□□□□ 0.28
OPHN1O60890 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.83■□□□□ 0.28
OPHN1O60890 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 AC005622.1-201ENST00000636801 1703 ntBASIC16.83■□□□□ 0.28
OPHN1O60890 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.83■□□□□ 0.28
OPHN1O60890 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPHN1O60890 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OPHN1O60890 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
OPHN1O60890 TUBB3P1-201ENST00000405796 1332 ntBASIC16.82■□□□□ 0.28
OPHN1O60890 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 GK-202ENST00000378941 458 ntTSL 3 BASIC16.82■□□□□ 0.28
OPHN1O60890 TSPY16P-201ENST00000449843 468 ntBASIC16.82■□□□□ 0.28
OPHN1O60890 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.82■□□□□ 0.28
OPHN1O60890 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.82■□□□□ 0.28
OPHN1O60890 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 AC051619.7-201ENST00000568314 623 ntBASIC16.82■□□□□ 0.28
OPHN1O60890 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.82■□□□□ 0.28
OPHN1O60890 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPHN1O60890 AL009183.1-201ENST00000603760 355 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms