Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.34■□□□□ 0.53
CYTH3O43739 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYTH3O43739 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CYTH3O43739 DOC2GP-202ENST00000514950 1163 ntBASIC18.34■□□□□ 0.53
CYTH3O43739 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.34■□□□□ 0.53
CYTH3O43739 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYTH3O43739 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYTH3O43739 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.34■□□□□ 0.53
CYTH3O43739 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYTH3O43739 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYTH3O43739 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CYTH3O43739 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYTH3O43739 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.33■□□□□ 0.53
CYTH3O43739 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CYTH3O43739 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.33■□□□□ 0.52
CYTH3O43739 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.33■□□□□ 0.52
CYTH3O43739 SPDYE19P-201ENST00000338590 713 ntBASIC18.33■□□□□ 0.52
CYTH3O43739 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.33■□□□□ 0.52
CYTH3O43739 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CYTH3O43739 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.33■□□□□ 0.52
CYTH3O43739 AC023310.3-201ENST00000557027 670 ntBASIC18.33■□□□□ 0.52
CYTH3O43739 AC100756.1-201ENST00000562736 682 ntBASIC18.33■□□□□ 0.52
CYTH3O43739 AC138749.3-201ENST00000567691 622 ntBASIC18.33■□□□□ 0.52
CYTH3O43739 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.33■□□□□ 0.52
CYTH3O43739 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.33■□□□□ 0.52
CYTH3O43739 AL391069.4-201ENST00000609583 481 ntBASIC18.33■□□□□ 0.52
CYTH3O43739 AC116165.1-201ENST00000611806 668 ntBASIC18.33■□□□□ 0.52
CYTH3O43739 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.33■□□□□ 0.52
CYTH3O43739 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CYTH3O43739 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.33■□□□□ 0.52
CYTH3O43739 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.33■□□□□ 0.52
CYTH3O43739 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYTH3O43739 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.32■□□□□ 0.52
CYTH3O43739 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.32■□□□□ 0.52
CYTH3O43739 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CYTH3O43739 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CYTH3O43739 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 AL035633.1-201ENST00000406139 838 ntBASIC18.32■□□□□ 0.52
CYTH3O43739 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.32■□□□□ 0.52
CYTH3O43739 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.32■□□□□ 0.52
CYTH3O43739 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.32■□□□□ 0.52
CYTH3O43739 API5-211ENST00000534695 560 ntTSL 5 BASIC18.32■□□□□ 0.52
CYTH3O43739 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.32■□□□□ 0.52
CYTH3O43739 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CYTH3O43739 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.32■□□□□ 0.52
CYTH3O43739 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.32■□□□□ 0.52
CYTH3O43739 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
CYTH3O43739 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
CYTH3O43739 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYTH3O43739 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.32■□□□□ 0.52
CYTH3O43739 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CYTH3O43739 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms