Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF13O43567 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF13O43567 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF13O43567 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 TNRC18P2-201ENST00000417666 2714 ntBASIC14.67□□□□□ -0.06
RNF13O43567 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF13O43567 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 AC073439.1-201ENST00000624121 1774 ntBASIC14.67□□□□□ -0.06
RNF13O43567 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF13O43567 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF13O43567 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF13O43567 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF13O43567 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 AP002472.1-201ENST00000577490 586 ntBASIC14.66□□□□□ -0.06
RNF13O43567 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.66□□□□□ -0.06
RNF13O43567 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RNF13O43567 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RNF13O43567 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF13O43567 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF13O43567 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF13O43567 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RNF13O43567 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RNF13O43567 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF13O43567 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF13O43567 PRYP6-201ENST00000514804 343 ntBASIC14.65□□□□□ -0.06
RNF13O43567 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms