Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PCDHB17P-201ENST00000539533 2393 ntBASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AC087499.5-201ENST00000452760 1342 ntBASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 MIR4492-201ENST00000581627 80 ntBASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SATB2Q9UPW6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 RPL37AP1-201ENST00000412502 279 ntBASIC15.77■□□□□ 0.12
SATB2Q9UPW6 ARSEP1-201ENST00000420443 635 ntBASIC15.77■□□□□ 0.12
SATB2Q9UPW6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 U91328.1-201ENST00000437528 223 ntBASIC15.77■□□□□ 0.12
SATB2Q9UPW6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.77■□□□□ 0.12
SATB2Q9UPW6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms