Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 AC135586.1-201ENST00000539323 574 ntBASIC21.4■■□□□ 1.02
CFAP53Q96M91 AC009118.2-201ENST00000613275 655 ntBASIC21.4■■□□□ 1.02
CFAP53Q96M91 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.4■■□□□ 1.02
CFAP53Q96M91 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CFAP53Q96M91 AL513523.2-202ENST00000427283 2040 ntBASIC21.39■■□□□ 1.02
CFAP53Q96M91 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CFAP53Q96M91 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CFAP53Q96M91 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CFAP53Q96M91 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CFAP53Q96M91 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CFAP53Q96M91 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CFAP53Q96M91 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AC114501.2-201ENST00000439631 535 ntBASIC21.39■■□□□ 1.01
CFAP53Q96M91 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AC074044.1-201ENST00000609673 707 ntBASIC21.39■■□□□ 1.01
CFAP53Q96M91 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AC004840.1-201ENST00000636359 365 ntBASIC21.39■■□□□ 1.01
CFAP53Q96M91 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CFAP53Q96M91 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CFAP53Q96M91 AL603832.2-201ENST00000566195 2125 ntBASIC21.38■■□□□ 1.01
CFAP53Q96M91 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 MIR3197-201ENST00000582241 73 ntBASIC21.38■■□□□ 1.01
CFAP53Q96M91 RN7SL204P-201ENST00000582831 262 ntBASIC21.38■■□□□ 1.01
CFAP53Q96M91 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
CFAP53Q96M91 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CFAP53Q96M91 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms