Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.59□□□□□ -0.39
RAX2Q96IS3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.59□□□□□ -0.39
RAX2Q96IS3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAX2Q96IS3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAX2Q96IS3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAX2Q96IS3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAX2Q96IS3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAX2Q96IS3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RAX2Q96IS3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.58□□□□□ -0.39
RAX2Q96IS3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAX2Q96IS3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAX2Q96IS3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.58□□□□□ -0.39
RAX2Q96IS3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RAX2Q96IS3 AL035456.1-201ENST00000456064 1369 ntBASIC12.58□□□□□ -0.4
RAX2Q96IS3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AL035633.1-201ENST00000406139 838 ntBASIC12.58□□□□□ -0.4
RAX2Q96IS3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 MTND6P24-201ENST00000440466 518 ntBASIC12.58□□□□□ -0.4
RAX2Q96IS3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AL138828.2-201ENST00000615812 383 ntBASIC12.58□□□□□ -0.4
RAX2Q96IS3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AC100757.3-201ENST00000622361 1406 ntBASIC12.58□□□□□ -0.4
RAX2Q96IS3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.58□□□□□ -0.4
RAX2Q96IS3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAX2Q96IS3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AL589702.1-201ENST00000641229 1509 ntBASIC12.57□□□□□ -0.4
RAX2Q96IS3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AC236430.1-201ENST00000402231 743 ntBASIC12.57□□□□□ -0.4
RAX2Q96IS3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AC138761.1-201ENST00000584393 385 ntBASIC12.57□□□□□ -0.4
RAX2Q96IS3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 AL590560.3-201ENST00000623350 461 ntBASIC12.57□□□□□ -0.4
RAX2Q96IS3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.57□□□□□ -0.4
RAX2Q96IS3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAX2Q96IS3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms