Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 AF228730.7-201ENST00000641842 219 ntBASIC14.31□□□□□ -0.12
RFT1Q96AA3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 KRT8P39-201ENST00000396270 1433 ntBASIC14.31□□□□□ -0.12
RFT1Q96AA3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFT1Q96AA3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFT1Q96AA3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 SLC22A20-204ENST00000530038 1673 ntBASIC14.3□□□□□ -0.12
RFT1Q96AA3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.3□□□□□ -0.12
RFT1Q96AA3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 LINC01711-201ENST00000598340 967 ntBASIC14.3□□□□□ -0.12
RFT1Q96AA3 AL805961.1-202ENST00000641562 540 ntBASIC14.3□□□□□ -0.12
RFT1Q96AA3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RFT1Q96AA3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 AL359258.3-201ENST00000622910 2331 ntBASIC14.29□□□□□ -0.12
RFT1Q96AA3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFT1Q96AA3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 MIR648-201ENST00000385046 94 ntBASIC14.29□□□□□ -0.12
RFT1Q96AA3 LAGE3P1-201ENST00000425356 484 ntBASIC14.29□□□□□ -0.12
RFT1Q96AA3 RPS2P1-201ENST00000434010 821 ntBASIC14.29□□□□□ -0.12
RFT1Q96AA3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.29□□□□□ -0.12
RFT1Q96AA3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms