Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.35□□□□□ -0.27
PCNPQ8WW12 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 MIR6786-201ENST00000616843 113 ntBASIC13.35□□□□□ -0.27
PCNPQ8WW12 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 AL135999.2-201ENST00000622438 1686 ntBASIC13.34□□□□□ -0.27
PCNPQ8WW12 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 AC092127.1-201ENST00000567093 3455 ntBASIC13.34□□□□□ -0.27
PCNPQ8WW12 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 AL049637.2-201ENST00000641778 930 ntBASIC13.34□□□□□ -0.27
PCNPQ8WW12 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.34□□□□□ -0.27
PCNPQ8WW12 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCNPQ8WW12 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PCNPQ8WW12 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.33□□□□□ -0.27
PCNPQ8WW12 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCNPQ8WW12 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PCNPQ8WW12 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
PCNPQ8WW12 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
PCNPQ8WW12 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.27
PCNPQ8WW12 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCNPQ8WW12 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCNPQ8WW12 MROH4P-201ENST00000431302 1578 ntBASIC13.33□□□□□ -0.28
PCNPQ8WW12 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNPQ8WW12 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNPQ8WW12 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCNPQ8WW12 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
PCNPQ8WW12 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCNPQ8WW12 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms