Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.83■□□□□ 0.12
TRAM1L1Q8N609 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAM1L1Q8N609 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAM1L1Q8N609 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAM1L1Q8N609 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAM1L1Q8N609 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 BCRP1-201ENST00000444246 691 ntBASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 SDHAP3-202ENST00000515467 728 ntBASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AL096865.1-201ENST00000606796 927 ntBASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AJ011932.1-201ENST00000621707 465 ntBASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAM1L1Q8N609 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 BTBD7P1-201ENST00000447253 1453 ntBASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 HNRNPUP1-201ENST00000554987 333 ntBASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 AC009407.1-201ENST00000568958 598 ntBASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 AC025048.3-201ENST00000590609 569 ntBASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 AC005702.4-201ENST00000618393 416 ntBASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAM1L1Q8N609 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAM1L1Q8N609 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms