Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 MIR4321-201ENST00000592276 80 ntBASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 AC073347.1-201ENST00000421633 2643 ntBASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00346Q8IVM7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AC134407.2-201ENST00000625089 1978 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AC092384.3-202ENST00000564646 2873 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AL355306.1-201ENST00000415580 579 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AC245100.5-201ENST00000452108 331 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AL135744.1-201ENST00000565098 629 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 CICP13-201ENST00000422015 2789 ntBASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00346Q8IVM7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AC092850.2-201ENST00000623821 2697 ntBASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AL596257.1-201ENST00000641463 2694 ntBASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00346Q8IVM7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms