Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD3Q7Z3D4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 AC015911.4-201ENST00000588022 1070 ntBASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 AL603832.2-201ENST00000566195 2125 ntBASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD3Q7Z3D4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 MTND6P24-201ENST00000440466 518 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 FAM86GP-201ENST00000448322 971 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AL139010.1-201ENST00000454878 894 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AC125807.1-201ENST00000483097 614 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AC067863.1-201ENST00000494933 530 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AC026979.3-201ENST00000607315 403 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AC134407.2-201ENST00000625089 1978 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 AC010491.1-201ENST00000563101 2797 ntBASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD3Q7Z3D4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LYSMD3Q7Z3D4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LYSMD3Q7Z3D4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
LYSMD3Q7Z3D4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms