Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
MRPL54Q6P161 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 AC243591.1-201ENST00000452967 1364 ntBASIC12.2□□□□□ -0.46
MRPL54Q6P161 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 LINC01230-201ENST00000625222 3017 ntBASIC12.2□□□□□ -0.46
MRPL54Q6P161 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 AC010654.1-201ENST00000615722 808 ntBASIC12.2□□□□□ -0.46
MRPL54Q6P161 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.2□□□□□ -0.46
MRPL54Q6P161 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 AGAP7P-201ENST00000582299 2062 ntBASIC12.2□□□□□ -0.46
MRPL54Q6P161 AGAP14-201ENST00000624701 2060 ntBASIC12.2□□□□□ -0.46
MRPL54Q6P161 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL54Q6P161 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL54Q6P161 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 FAM87A-204ENST00000613235 858 ntBASIC12.19□□□□□ -0.46
MRPL54Q6P161 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.19□□□□□ -0.46
MRPL54Q6P161 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 PEG13-201ENST00000631594 5667 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms