Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 REEP1-202ENST00000453231 940 ntTSL 2 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 AC124067.4-201ENST00000519691 2379 ntBASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 AHCYP2-201ENST00000430630 1300 ntBASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 RPS3-201ENST00000278572 907 ntTSL 3 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 BTBD6P1-201ENST00000412176 1267 ntBASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 HIST2H2BC-201ENST00000498492 580 ntBASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 AC004898.1-201ENST00000451057 766 ntBASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CDC42BPAQ5VT25 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 AL022328.3-201ENST00000607943 679 ntBASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPAQ5VT25 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 AL138799.1-201ENST00000448213 1675 ntBASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 POM121L8P-201ENST00000417732 1281 ntBASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 POM121L9P-203ENST00000441984 1285 ntBASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 CHMP4BP1-201ENST00000556017 588 ntBASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 BX539320.1-201ENST00000623759 877 ntBASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 AL023775.1-201ENST00000454907 1746 ntBASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPAQ5VT25 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 NEU3-202ENST00000526068 431 ntTSL 2 BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 AC023310.1-201ENST00000554836 735 ntBASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.7■■□□□ 1.39
CDC42BPAQ5VT25 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 AC069224.1-201ENST00000566372 1715 ntBASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 TISP43-201ENST00000409793 538 ntTSL 4 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms