Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AC138969.3-201ENST00000546612 1459 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AC138932.2-201ENST00000548268 1459 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AC126755.4-201ENST00000549796 1459 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 OR8S1-201ENST00000310194 1080 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 PHKG1P2-201ENST00000457537 863 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AC007431.3-201ENST00000623221 587 ntBASIC19.26■□□□□ 0.67
RFX7Q2KHR2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX7Q2KHR2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 AC008494.3-201ENST00000606615 944 ntBASIC19.25■□□□□ 0.67
RFX7Q2KHR2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFX7Q2KHR2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 SDHAP3-202ENST00000515467 728 ntBASIC19.24■□□□□ 0.67
RFX7Q2KHR2 AC023310.3-201ENST00000557027 670 ntBASIC19.24■□□□□ 0.67
RFX7Q2KHR2 AC100756.1-201ENST00000562736 682 ntBASIC19.24■□□□□ 0.67
RFX7Q2KHR2 AC138749.3-201ENST00000567691 622 ntBASIC19.24■□□□□ 0.67
RFX7Q2KHR2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 AL391069.4-201ENST00000609583 481 ntBASIC19.24■□□□□ 0.67
RFX7Q2KHR2 AC116165.1-201ENST00000611806 668 ntBASIC19.24■□□□□ 0.67
RFX7Q2KHR2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.24■□□□□ 0.67
RFX7Q2KHR2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RFX7Q2KHR2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms