Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 KRT18P3-201ENST00000451602 1288 ntBASIC17.62■□□□□ 0.41
KRT9P35527 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.62■□□□□ 0.41
KRT9P35527 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.62■□□□□ 0.41
KRT9P35527 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.62■□□□□ 0.41
KRT9P35527 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT9P35527 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT9P35527 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT9P35527 AC140113.2-201ENST00000604370 208 ntBASIC17.62■□□□□ 0.41
KRT9P35527 FAM197Y3-203ENST00000618346 717 ntBASIC17.62■□□□□ 0.41
KRT9P35527 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KRT9P35527 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 AC006486.2-201ENST00000624246 2199 ntBASIC17.62■□□□□ 0.41
KRT9P35527 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT9P35527 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
KRT9P35527 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
KRT9P35527 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 AC140658.5-201ENST00000438532 169 ntBASIC17.61■□□□□ 0.41
KRT9P35527 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
KRT9P35527 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KRT9P35527 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.61■□□□□ 0.41
KRT9P35527 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT9P35527 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT9P35527 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
KRT9P35527 AL009183.1-201ENST00000603760 355 ntBASIC17.61■□□□□ 0.41
KRT9P35527 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT9P35527 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
KRT9P35527 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT9P35527 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT9P35527 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT9P35527 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT9P35527 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
KRT9P35527 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT9P35527 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT9P35527 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KRT9P35527 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
KRT9P35527 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
KRT9P35527 AC109635.5-201ENST00000533593 962 ntBASIC17.6■□□□□ 0.41
KRT9P35527 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT9P35527 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.6■□□□□ 0.41
KRT9P35527 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT9P35527 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT9P35527 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms