Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HOXC12P31275 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 FAM220BP-201ENST00000377689 816 ntBASIC14.3□□□□□ -0.12
HOXC12P31275 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.3□□□□□ -0.12
HOXC12P31275 SERBP1P5-201ENST00000510079 1181 ntBASIC14.3□□□□□ -0.12
HOXC12P31275 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 AC026979.3-201ENST00000607315 403 ntBASIC14.3□□□□□ -0.12
HOXC12P31275 AC018529.1-201ENST00000613063 361 ntBASIC14.3□□□□□ -0.12
HOXC12P31275 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
HOXC12P31275 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HOXC12P31275 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HOXC12P31275 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXC12P31275 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HOXC12P31275 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.29□□□□□ -0.12
HOXC12P31275 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 COX5BP8-201ENST00000416911 349 ntBASIC14.29□□□□□ -0.12
HOXC12P31275 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.29□□□□□ -0.12
HOXC12P31275 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.29□□□□□ -0.12
HOXC12P31275 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.29□□□□□ -0.12
HOXC12P31275 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.29□□□□□ -0.12
HOXC12P31275 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 AC009118.2-201ENST00000613275 655 ntBASIC14.29□□□□□ -0.12
HOXC12P31275 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 AP3S2-216ENST00000617003 1561 ntBASIC14.29□□□□□ -0.12
HOXC12P31275 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.29□□□□□ -0.12
HOXC12P31275 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HOXC12P31275 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
HOXC12P31275 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HOXC12P31275 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 AC011676.5-201ENST00000624864 2660 ntBASIC14.28□□□□□ -0.12
HOXC12P31275 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HOXC12P31275 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.28□□□□□ -0.12
HOXC12P31275 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
HOXC12P31275 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXC12P31275 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXC12P31275 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms