Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.79□□□□□ -0.04
SHC1P29353 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.79□□□□□ -0.04
SHC1P29353 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.79□□□□□ -0.04
SHC1P29353 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SHC1P29353 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SHC1P29353 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.78□□□□□ -0.04
SHC1P29353 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.78□□□□□ -0.04
SHC1P29353 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.78□□□□□ -0.04
SHC1P29353 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.78□□□□□ -0.04
SHC1P29353 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.78□□□□□ -0.04
SHC1P29353 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.78□□□□□ -0.04
SHC1P29353 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 SLC25A39P2-201ENST00000537614 270 ntBASIC14.78□□□□□ -0.04
SHC1P29353 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SHC1P29353 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.78□□□□□ -0.04
SHC1P29353 AC004835.2-201ENST00000603762 682 ntBASIC14.78□□□□□ -0.04
SHC1P29353 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.78□□□□□ -0.04
SHC1P29353 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.78□□□□□ -0.04
SHC1P29353 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
SHC1P29353 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHC1P29353 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.77□□□□□ -0.04
SHC1P29353 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SHC1P29353 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.77□□□□□ -0.04
SHC1P29353 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SHC1P29353 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.77□□□□□ -0.04
SHC1P29353 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.77□□□□□ -0.04
SHC1P29353 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHC1P29353 MIR346-201ENST00000362234 95 ntBASIC14.77□□□□□ -0.05
SHC1P29353 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.77□□□□□ -0.05
SHC1P29353 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.77□□□□□ -0.05
SHC1P29353 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.77□□□□□ -0.05
SHC1P29353 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.77□□□□□ -0.05
SHC1P29353 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.77□□□□□ -0.05
SHC1P29353 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.77□□□□□ -0.05
SHC1P29353 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.77□□□□□ -0.05
SHC1P29353 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.77□□□□□ -0.05
SHC1P29353 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
SHC1P29353 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
SHC1P29353 AC073347.1-201ENST00000421633 2643 ntBASIC14.77□□□□□ -0.05
SHC1P29353 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHC1P29353 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.76□□□□□ -0.05
SHC1P29353 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.76□□□□□ -0.05
SHC1P29353 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms