Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH16O75309 AC091951.1-201ENST00000512854 2465 ntBASIC16.29■□□□□ 0.2
CDH16O75309 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDH16O75309 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH16O75309 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 CICP23-201ENST00000605013 2741 ntBASIC16.29■□□□□ 0.2
CDH16O75309 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
CDH16O75309 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH16O75309 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 AC023908.3-201ENST00000564211 3047 ntBASIC16.28■□□□□ 0.2
CDH16O75309 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH16O75309 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CDH16O75309 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH16O75309 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH16O75309 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH16O75309 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH16O75309 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDH16O75309 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH16O75309 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH16O75309 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDH16O75309 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CDH16O75309 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH16O75309 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 AC073621.1-201ENST00000392730 636 ntBASIC16.27■□□□□ 0.2
CDH16O75309 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH16O75309 TPM4P1-201ENST00000436100 807 ntBASIC16.27■□□□□ 0.2
CDH16O75309 AC136632.2-201ENST00000512891 861 ntBASIC16.27■□□□□ 0.2
CDH16O75309 AP002469.2-201ENST00000531724 424 ntBASIC16.27■□□□□ 0.2
CDH16O75309 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH16O75309 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CDH16O75309 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH16O75309 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CDH16O75309 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDH16O75309 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
CDH16O75309 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH16O75309 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH16O75309 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDH16O75309 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CDH16O75309 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDH16O75309 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH16O75309 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms