Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.26■□□□□ 0.19
AP3B1O00203 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 AC004832.2-201ENST00000426397 482 ntBASIC16.26■□□□□ 0.19
AP3B1O00203 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.26■□□□□ 0.19
AP3B1O00203 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.26■□□□□ 0.19
AP3B1O00203 RNA5SP410-201ENST00000516285 106 ntBASIC16.26■□□□□ 0.19
AP3B1O00203 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 MTDHP5-201ENST00000598980 586 ntBASIC16.26■□□□□ 0.19
AP3B1O00203 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 C20orf181-201ENST00000623918 480 ntBASIC16.26■□□□□ 0.19
AP3B1O00203 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP3B1O00203 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3B1O00203 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP3B1O00203 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP3B1O00203 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.25■□□□□ 0.19
AP3B1O00203 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
AP3B1O00203 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.25■□□□□ 0.19
AP3B1O00203 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AP3B1O00203 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
AP3B1O00203 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 ADH5P3-201ENST00000433842 1137 ntBASIC16.25■□□□□ 0.19
AP3B1O00203 AL139010.1-201ENST00000454878 894 ntBASIC16.25■□□□□ 0.19
AP3B1O00203 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.25■□□□□ 0.19
AP3B1O00203 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.25■□□□□ 0.19
AP3B1O00203 AP000842.3-202ENST00000569238 1080 ntBASIC16.25■□□□□ 0.19
AP3B1O00203 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
AP3B1O00203 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 AC134407.2-201ENST00000625089 1978 ntBASIC16.25■□□□□ 0.19
AP3B1O00203 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.25■□□□□ 0.19
AP3B1O00203 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP3B1O00203 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
AP3B1O00203 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3B1O00203 AC020658.6-201ENST00000623564 1870 ntBASIC16.25■□□□□ 0.19
AP3B1O00203 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3B1O00203 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3B1O00203 FOXO1B-201ENST00000504678 1527 ntBASIC16.24■□□□□ 0.19
AP3B1O00203 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
AP3B1O00203 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3B1O00203 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3B1O00203 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms