Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 AL365330.1-201ENST00000607459 531 ntBASIC17.99■□□□□ 0.47
CBX8Q9HC52 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX8Q9HC52 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX8Q9HC52 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CBX8Q9HC52 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX8Q9HC52 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CBX8Q9HC52 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CBX8Q9HC52 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.99■□□□□ 0.47
CBX8Q9HC52 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CBX8Q9HC52 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 LINC00552-201ENST00000625151 2579 ntBASIC17.98■□□□□ 0.47
CBX8Q9HC52 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 RPS2P1-201ENST00000434010 821 ntBASIC17.98■□□□□ 0.47
CBX8Q9HC52 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 KRT8P44-201ENST00000441609 1350 ntBASIC17.98■□□□□ 0.47
CBX8Q9HC52 AP001282.1-201ENST00000531301 1499 ntBASIC17.98■□□□□ 0.47
CBX8Q9HC52 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 LINC00528-201ENST00000600723 2160 ntBASIC17.98■□□□□ 0.47
CBX8Q9HC52 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 AC005089.1-201ENST00000619486 2241 ntBASIC17.98■□□□□ 0.47
CBX8Q9HC52 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CBX8Q9HC52 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX8Q9HC52 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 MRPL20P1-201ENST00000400819 433 ntBASIC17.97■□□□□ 0.47
CBX8Q9HC52 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 AC093458.2-201ENST00000623150 629 ntBASIC17.97■□□□□ 0.47
CBX8Q9HC52 AC007191.1-201ENST00000623179 2995 ntBASIC17.97■□□□□ 0.47
CBX8Q9HC52 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX8Q9HC52 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX8Q9HC52 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX8Q9HC52 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX8Q9HC52 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CBX8Q9HC52 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX8Q9HC52 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CBX8Q9HC52 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX8Q9HC52 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX8Q9HC52 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX8Q9HC52 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms