Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.5□□□□□ -0.09
USB1Q9BQ65 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.5□□□□□ -0.09
USB1Q9BQ65 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.5□□□□□ -0.09
USB1Q9BQ65 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.5□□□□□ -0.09
USB1Q9BQ65 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
USB1Q9BQ65 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 AL139400.1-201ENST00000366220 510 ntBASIC14.49□□□□□ -0.09
USB1Q9BQ65 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 HLA-J-202ENST00000469281 1241 ntBASIC14.49□□□□□ -0.09
USB1Q9BQ65 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.49□□□□□ -0.09
USB1Q9BQ65 AC092053.1-201ENST00000605787 1936 ntBASIC14.49□□□□□ -0.09
USB1Q9BQ65 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
USB1Q9BQ65 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 HSFY1P1-201ENST00000423928 1178 ntBASIC14.48□□□□□ -0.09
USB1Q9BQ65 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 RBPMS2P1-201ENST00000437762 623 ntBASIC14.48□□□□□ -0.09
USB1Q9BQ65 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 USP9YP2-201ENST00000504503 1000 ntBASIC14.48□□□□□ -0.09
USB1Q9BQ65 USP9YP1-201ENST00000513521 1002 ntBASIC14.48□□□□□ -0.09
USB1Q9BQ65 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.48□□□□□ -0.09
USB1Q9BQ65 AC105148.1-201ENST00000604961 409 ntBASIC14.48□□□□□ -0.09
USB1Q9BQ65 AL157762.1-201ENST00000619612 415 ntBASIC14.48□□□□□ -0.09
USB1Q9BQ65 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms