Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 MTND6P24-201ENST00000440466 518 ntBASIC16.32■□□□□ 0.2
SEMA3CQ99985 CNN2P2-201ENST00000443536 909 ntBASIC16.32■□□□□ 0.2
SEMA3CQ99985 CNN2P3-201ENST00000450201 906 ntBASIC16.32■□□□□ 0.2
SEMA3CQ99985 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEMA3CQ99985 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEMA3CQ99985 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEMA3CQ99985 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SEMA3CQ99985 AL136317.3-201ENST00000618497 906 ntBASIC16.32■□□□□ 0.2
SEMA3CQ99985 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEMA3CQ99985 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEMA3CQ99985 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEMA3CQ99985 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 AL365203.3-201ENST00000609742 2057 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 BNIP3P1-202ENST00000550043 1585 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 CYP4F24P-201ENST00000586049 1580 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 AL035456.1-201ENST00000456064 1369 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 TUBB3P1-201ENST00000405796 1332 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 RN7SL828P-201ENST00000607615 303 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 AP003680.1-201ENST00000598970 3660 ntBASIC16.31■□□□□ 0.2
SEMA3CQ99985 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEMA3CQ99985 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
SEMA3CQ99985 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 AC004987.2-201ENST00000395959 1148 ntBASIC16.3■□□□□ 0.2
SEMA3CQ99985 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 BCRP1-201ENST00000444246 691 ntBASIC16.3■□□□□ 0.2
SEMA3CQ99985 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.3■□□□□ 0.2
SEMA3CQ99985 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEMA3CQ99985 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms