Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 SPDYE17-201ENST00000412399 783 ntBASIC16.56■□□□□ 0.24
RPRD1AQ96P16 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 SERBP1P3-201ENST00000459980 809 ntBASIC16.56■□□□□ 0.24
RPRD1AQ96P16 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RPRD1AQ96P16 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.55■□□□□ 0.24
RPRD1AQ96P16 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 SPCS2P1-201ENST00000561636 679 ntBASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 BNIP3P1-202ENST00000550043 1585 ntBASIC16.55■□□□□ 0.24
RPRD1AQ96P16 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.55■□□□□ 0.24
RPRD1AQ96P16 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPRD1AQ96P16 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RPRD1AQ96P16 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms