Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 AC093724.1-201ENST00000448659 1027 ntBASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 GGTLC5P-201ENST00000617623 998 ntBASIC13.87□□□□□ -0.19
CMTM3Q96MX0 AC005912.2-201ENST00000619492 2400 ntBASIC13.87□□□□□ -0.19
CMTM3Q96MX0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CMTM3Q96MX0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AC148477.4-201ENST00000613430 1793 ntBASIC13.86□□□□□ -0.19
CMTM3Q96MX0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AC012569.1-201ENST00000591191 1524 ntBASIC13.86□□□□□ -0.19
CMTM3Q96MX0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CMTM3Q96MX0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms