Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.79□□□□□ -0.2
USP9XQ93008 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
USP9XQ93008 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.79□□□□□ -0.2
USP9XQ93008 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USP9XQ93008 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.78□□□□□ -0.2
USP9XQ93008 RPSAP31-201ENST00000416648 895 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.78□□□□□ -0.2
USP9XQ93008 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.78□□□□□ -0.2
USP9XQ93008 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 AC073352.2-201ENST00000609385 439 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 RN7SL736P-201ENST00000613111 269 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
USP9XQ93008 AC005622.1-201ENST00000636801 1703 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
USP9XQ93008 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
USP9XQ93008 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
USP9XQ93008 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.78□□□□□ -0.2
USP9XQ93008 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 AC245100.5-201ENST00000452108 331 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.78□□□□□ -0.2
USP9XQ93008 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 RN7SL774P-201ENST00000577467 290 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.78□□□□□ -0.2
USP9XQ93008 AC100757.4-201ENST00000626934 759 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 TUBBP5-203ENST00000508529 1334 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.78□□□□□ -0.2
USP9XQ93008 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
USP9XQ93008 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USP9XQ93008 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 SLED1-202ENST00000512051 380 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 RNA5SP486-201ENST00000515961 83 ntBASIC13.78□□□□□ -0.2
USP9XQ93008 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.78□□□□□ -0.2
USP9XQ93008 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
USP9XQ93008 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.2
USP9XQ93008 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.77□□□□□ -0.2
USP9XQ93008 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
USP9XQ93008 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
USP9XQ93008 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
USP9XQ93008 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
USP9XQ93008 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.77□□□□□ -0.21
USP9XQ93008 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.77□□□□□ -0.21
USP9XQ93008 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.77□□□□□ -0.21
USP9XQ93008 AC234782.1-201ENST00000451950 919 ntBASIC13.77□□□□□ -0.21
USP9XQ93008 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USP9XQ93008 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USP9XQ93008 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USP9XQ93008 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.77□□□□□ -0.21
USP9XQ93008 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
USP9XQ93008 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USP9XQ93008 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
USP9XQ93008 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USP9XQ93008 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USP9XQ93008 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms