Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC24.53■■□□□ 1.52
CASKIN1Q8WXD9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 CNN2P8-201ENST00000421872 913 ntBASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 AC007551.1-201ENST00000457394 519 ntBASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 AC025279.2-201ENST00000569730 653 ntBASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 HADH-212ENST00000638621 741 ntTSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC24.52■■□□□ 1.52
CASKIN1Q8WXD9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 RHOXF1P1-202ENST00000635473 501 ntBASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASKIN1Q8WXD9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 FZD10-202ENST00000539839 3282 ntBASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AL138709.1-201ENST00000614840 1693 ntBASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AC026954.1-201ENST00000429771 1293 ntBASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AC016694.1-201ENST00000434179 700 ntBASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 ACTBP11-201ENST00000436287 1126 ntBASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 DUX4L45-201ENST00000566406 1057 ntBASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC24.5■■□□□ 1.51
CASKIN1Q8WXD9 AC092364.2-201ENST00000596710 2692 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms