Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PCP4P48539 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
PCP4P48539 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
PCP4P48539 SMCR5-201ENST00000543475 2844 ntBASIC10.77□□□□□ -0.68
PCP4P48539 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
PCP4P48539 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC10.77□□□□□ -0.68
PCP4P48539 KLK2-203ENST00000391810 2674 ntTSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC10.77□□□□□ -0.69
PCP4P48539 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC10.77□□□□□ -0.69
PCP4P48539 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 AP004607.4-201ENST00000530158 1459 ntBASIC10.77□□□□□ -0.69
PCP4P48539 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC10.77□□□□□ -0.69
PCP4P48539 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
PCP4P48539 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
PCP4P48539 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
PCP4P48539 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.77□□□□□ -0.69
PCP4P48539 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 AP000437.1-201ENST00000624057 2085 ntBASIC10.77□□□□□ -0.69
PCP4P48539 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PCP4P48539 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.77□□□□□ -0.69
PCP4P48539 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 AC087481.3-201ENST00000602886 1894 ntBASIC10.76□□□□□ -0.69
PCP4P48539 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 AC018529.2-202ENST00000611482 3087 ntBASIC10.76□□□□□ -0.69
PCP4P48539 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 PTPRVP-205ENST00000641549 5067 ntBASIC10.76□□□□□ -0.69
PCP4P48539 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 KHSRPP1-201ENST00000427983 1768 ntBASIC10.76□□□□□ -0.69
PCP4P48539 AL590552.1-201ENST00000623164 1770 ntBASIC10.76□□□□□ -0.69
PCP4P48539 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC10.76□□□□□ -0.69
PCP4P48539 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 MYC-208ENST00000641036 567 ntBASIC10.76□□□□□ -0.69
PCP4P48539 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms