Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN7P35236 AC243562.1-201ENST00000560672 389 ntBASIC16.62■□□□□ 0.25
PTPN7P35236 AP000842.3-202ENST00000569238 1080 ntBASIC16.62■□□□□ 0.25
PTPN7P35236 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN7P35236 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
PTPN7P35236 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.62■□□□□ 0.25
PTPN7P35236 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PTPN7P35236 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 REXO1L1P-202ENST00000608646 1974 ntBASIC16.62■□□□□ 0.25
PTPN7P35236 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 AC023157.3-201ENST00000619086 2088 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN7P35236 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN7P35236 AC087481.3-201ENST00000602886 1894 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PTPN7P35236 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN7P35236 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN7P35236 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN7P35236 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN7P35236 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN7P35236 FAM58CP-201ENST00000435741 640 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN7P35236 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN7P35236 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN7P35236 MIR4313-201ENST00000580760 101 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN7P35236 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PTPN7P35236 AC084121.4-201ENST00000641598 221 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 AF228730.8-201ENST00000642140 221 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PTPN7P35236 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PTPN7P35236 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN7P35236 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN7P35236 AC006486.2-201ENST00000624246 2199 ntBASIC16.61■□□□□ 0.25
PTPN7P35236 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN7P35236 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 LINC00554-201ENST00000564841 3011 ntBASIC16.6■□□□□ 0.25
PTPN7P35236 AL109954.1-202ENST00000564051 2148 ntBASIC16.6■□□□□ 0.25
PTPN7P35236 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PTPN7P35236 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN7P35236 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN7P35236 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN7P35236 HLA-H-201ENST00000383620 1096 ntBASIC16.6■□□□□ 0.25
PTPN7P35236 MCCD1P2-201ENST00000423228 335 ntBASIC16.6■□□□□ 0.25
PTPN7P35236 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN7P35236 KRT8P23-201ENST00000560090 1207 ntBASIC16.6■□□□□ 0.25
PTPN7P35236 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN7P35236 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN7P35236 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN7P35236 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PTPN7P35236 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN7P35236 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN7P35236 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN7P35236 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.6■□□□□ 0.25
PTPN7P35236 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms