Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND3P03897 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND3P03897 AL161772.1-201ENST00000610494 4412 ntBASIC16.48■□□□□ 0.23
MT-ND3P03897 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND3P03897 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MT-ND3P03897 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND3P03897 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.47■□□□□ 0.23
MT-ND3P03897 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND3P03897 HCG4-201ENST00000418983 998 ntBASIC16.47■□□□□ 0.23
MT-ND3P03897 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND3P03897 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 VN2R19P-201ENST00000442399 1052 ntBASIC16.47■□□□□ 0.23
MT-ND3P03897 AC108073.2-201ENST00000464002 357 ntBASIC16.47■□□□□ 0.23
MT-ND3P03897 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-ND3P03897 AC107918.2-201ENST00000530817 355 ntBASIC16.47■□□□□ 0.23
MT-ND3P03897 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND3P03897 AC005412.3-201ENST00000580309 715 ntBASIC16.47■□□□□ 0.23
MT-ND3P03897 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
MT-ND3P03897 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND3P03897 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-ND3P03897 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-ND3P03897 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 AC006058.4-201ENST00000624016 1670 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MT-ND3P03897 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND3P03897 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-ND3P03897 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MT-ND3P03897 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 MRPL20P1-201ENST00000400819 433 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 AC023274.1-201ENST00000418278 595 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.46■□□□□ 0.23
MT-ND3P03897 MCCD1P2-201ENST00000423228 335 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-ND3P03897 AC004967.1-201ENST00000453589 447 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-ND3P03897 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND3P03897 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 AC055717.3-201ENST00000622967 595 ntBASIC16.46■□□□□ 0.23
MT-ND3P03897 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND3P03897 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND3P03897 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-ND3P03897 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.46■□□□□ 0.23
MT-ND3P03897 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
MT-ND3P03897 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-ND3P03897 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-ND3P03897 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND3P03897 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND3P03897 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND3P03897 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MT-ND3P03897 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms