Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 AC124067.4-201ENST00000519691 2379 ntBASIC14.39□□□□□ -0.11
CXCL13O43927 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL13O43927 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.39□□□□□ -0.11
CXCL13O43927 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 KRT8P12-202ENST00000472924 1397 ntBASIC14.39□□□□□ -0.11
CXCL13O43927 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL13O43927 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CXCL13O43927 AC004987.2-201ENST00000395959 1148 ntBASIC14.39□□□□□ -0.11
CXCL13O43927 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 SPDYE17-201ENST00000412399 783 ntBASIC14.39□□□□□ -0.11
CXCL13O43927 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.39□□□□□ -0.11
CXCL13O43927 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.39□□□□□ -0.11
CXCL13O43927 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL13O43927 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 AC134407.2-201ENST00000625089 1978 ntBASIC14.39□□□□□ -0.11
CXCL13O43927 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL13O43927 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CXCL13O43927 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL13O43927 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL13O43927 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 BNIP3P1-202ENST00000550043 1585 ntBASIC14.39□□□□□ -0.11
CXCL13O43927 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL13O43927 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 AP001282.1-201ENST00000531301 1499 ntBASIC14.38□□□□□ -0.11
CXCL13O43927 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCL13O43927 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.38□□□□□ -0.11
CXCL13O43927 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 SERBP1P3-201ENST00000459980 809 ntBASIC14.38□□□□□ -0.11
CXCL13O43927 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCL13O43927 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.38□□□□□ -0.11
CXCL13O43927 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCL13O43927 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCL13O43927 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CXCL13O43927 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CXCL13O43927 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL13O43927 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms