Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC7A4O43246 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC7A4O43246 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SLC7A4O43246 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC7A4O43246 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC7A4O43246 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 CDC14C-201ENST00000428251 1719 ntBASIC16.33■□□□□ 0.21
SLC7A4O43246 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC7A4O43246 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC7A4O43246 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
SLC7A4O43246 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SLC7A4O43246 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
SLC7A4O43246 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC7A4O43246 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC7A4O43246 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC7A4O43246 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC7A4O43246 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 RPL37AP1-201ENST00000412502 279 ntBASIC16.33■□□□□ 0.2
SLC7A4O43246 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC7A4O43246 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC7A4O43246 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC7A4O43246 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 AC009477.1-201ENST00000452936 217 ntBASIC16.33■□□□□ 0.2
SLC7A4O43246 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC7A4O43246 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.33■□□□□ 0.2
SLC7A4O43246 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.33■□□□□ 0.2
SLC7A4O43246 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC7A4O43246 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC7A4O43246 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC7A4O43246 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC7A4O43246 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC7A4O43246 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC7A4O43246 AC069224.1-201ENST00000566372 1715 ntBASIC16.33■□□□□ 0.2
SLC7A4O43246 LINC02447-202ENST00000501888 2146 ntBASIC16.33■□□□□ 0.2
SLC7A4O43246 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC7A4O43246 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC7A4O43246 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SLC7A4O43246 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SLC7A4O43246 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
SLC7A4O43246 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 AL080243.2-201ENST00000418783 582 ntBASIC16.32■□□□□ 0.2
SLC7A4O43246 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC7A4O43246 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC7A4O43246 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC7A4O43246 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC7A4O43246 ZNF890P-202ENST00000530367 1156 ntBASIC16.32■□□□□ 0.2
SLC7A4O43246 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 AC010491.1-201ENST00000563101 2797 ntBASIC16.32■□□□□ 0.2
SLC7A4O43246 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC7A4O43246 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 AC112504.1-201ENST00000623415 1841 ntBASIC16.32■□□□□ 0.2
SLC7A4O43246 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC7A4O43246 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC7A4O43246 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.31■□□□□ 0.2
SLC7A4O43246 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC7A4O43246 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC7A4O43246 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC7A4O43246 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC7A4O43246 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC7A4O43246 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC7A4O43246 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms