Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 AC106818.1-201ENST00000623223 3242 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.33□□□□□ -0.44
COLCA2A8K830 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.33□□□□□ -0.44
COLCA2A8K830 KRT16P5-201ENST00000455284 522 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.33□□□□□ -0.44
COLCA2A8K830 AC137761.2-201ENST00000561729 223 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 LINC01238-205ENST00000567549 1107 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 AC145350.3-201ENST00000569033 163 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.33□□□□□ -0.44
COLCA2A8K830 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 AP001972.5-201ENST00000624624 2338 ntBASIC12.33□□□□□ -0.44
COLCA2A8K830 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.33□□□□□ -0.44
COLCA2A8K830 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COLCA2A8K830 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COLCA2A8K830 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC091874.3-201ENST00000512672 1195 ntBASIC12.32□□□□□ -0.44
COLCA2A8K830 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.32□□□□□ -0.44
COLCA2A8K830 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms