Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 HYMAI-201ENST00000635591 3347 ntBASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MIR3909-201ENST00000579518 119 ntBASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC021097.1-201ENST00000607902 574 ntBASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 Z92544.3-201ENST00000624747 417 ntBASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC010491.1-201ENST00000563101 2797 ntBASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 REXO1L8P-201ENST00000604378 1897 ntBASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FAM58DP-201ENST00000428076 619 ntBASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms