Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AC005912.2-201ENST00000619492 2400 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AC104819.1-201ENST00000504587 486 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AP002414.4-201ENST00000589764 1148 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AL591684.3-201ENST00000605187 298 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AL365330.1-201ENST00000607459 531 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AC021097.1-201ENST00000607902 574 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AC126755.1-201ENST00000525846 6405 ntBASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRDV1A0A1B0GX56 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 WASH6P-202ENST00000359512 1437 ntBASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 AC106795.1-205ENST00000512851 1056 ntBASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRDV1A0A1B0GX56 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms