Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC069224.1-201ENST00000566372 1715 ntBASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA11Q9Y5H2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 MIR574-201ENST00000385209 96 ntBASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AL022342.1-201ENST00000400363 863 ntBASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AC073389.1-201ENST00000595595 795 ntBASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AC022532.1-201ENST00000624563 1728 ntBASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA11Q9Y5H2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AC112504.1-201ENST00000623415 1841 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 HAUS4P1-201ENST00000406739 1145 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AL355306.1-201ENST00000415580 579 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 MCCD1P2-201ENST00000423228 335 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 FAM58CP-201ENST00000435741 640 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AC105233.2-201ENST00000523697 349 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AF228730.5-201ENST00000530288 346 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 MIR4321-201ENST00000592276 80 ntBASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA11Q9Y5H2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 AC073347.1-201ENST00000421633 2643 ntBASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA11Q9Y5H2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms