Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 LINC02447-202ENST00000501888 2146 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 RPL37AP1-201ENST00000412502 279 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 AC027369.6-201ENST00000525520 931 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 AL079307.3-201ENST00000556114 283 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 AL138828.2-201ENST00000615812 383 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 CETN4P-206ENST00000642099 2168 ntBASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC4Q9Y5F7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AC069224.1-201ENST00000566372 1715 ntBASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AC004987.2-201ENST00000395959 1148 ntBASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AC092580.3-201ENST00000430932 139 ntBASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 IGHV3-42-201ENST00000520410 361 ntBASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AL390955.2-201ENST00000603032 514 ntBASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AC073592.8-201ENST00000624126 511 ntBASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGC4Q9Y5F7 AP001282.1-201ENST00000531301 1499 ntBASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms