Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AC093724.1-201ENST00000448659 1027 ntBASIC14.42□□□□□ -0.1
COPS3Q9UNS2 EMBP1-201ENST00000458200 901 ntBASIC14.42□□□□□ -0.1
COPS3Q9UNS2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.42□□□□□ -0.1
COPS3Q9UNS2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 TNRC18P2-201ENST00000417666 2714 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PMS2P4-201ENST00000412466 1052 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 KRT18P67-201ENST00000432816 1264 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 AL513480.1-201ENST00000451731 511 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 AL031432.2-201ENST00000566714 459 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 AL928711.1-201ENST00000570165 459 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 MIR4751-201ENST00000578027 74 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 FAM215A-202ENST00000632077 792 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 AL009178.2-201ENST00000597278 2719 ntBASIC14.41□□□□□ -0.1
COPS3Q9UNS2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COPS3Q9UNS2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms