Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 AC024909.3-201ENST00000611513 2257 ntBASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPARGC1AQ9UBK2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PPARGC1AQ9UBK2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.83■□□□□ 0.29
PPARGC1AQ9UBK2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PPARGC1AQ9UBK2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.83■□□□□ 0.29
PPARGC1AQ9UBK2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 HLA-H-201ENST00000383620 1096 ntBASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 ALG1L8P-201ENST00000533887 760 ntBASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 REXO1L8P-201ENST00000604378 1897 ntBASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PPARGC1AQ9UBK2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 AP3S2-216ENST00000617003 1561 ntBASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 RBPMS2P1-201ENST00000437762 623 ntBASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 AL512356.2-201ENST00000546955 174 ntBASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 AC024267.1-201ENST00000582320 895 ntBASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 AP001059.3-201ENST00000619053 235 ntBASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.82■□□□□ 0.28
PPARGC1AQ9UBK2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 NORAD-201ENST00000565493 5339 ntBASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PPARGC1AQ9UBK2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms